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COURSE "METAGENOMICS"

DECEMBER 9-13, 2013

DETAILED INFORMATION:


Click here to view location Directed to: Students interested in Microbial Genomics and Microbiology; Number of attendants: 30; Admission:  Participants will be accepted by order of application. The course will be taught entirely in English.
Click here to view location Detailed Program: You can find complete course detailed program HERE
Brochure: You can find extra information in our brochure HERE

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Registration fee:  
Members of MicroGen and MaCuMBA: 50€                                                     Others: 100€
(includes attendance to lectures and practical sessions, wi-fi internet connection, sampling cruise and coffees)
Download the Registration Form HERE
Click here to view location Lodging: 
There are several hotels close to the course site, some of them can be found HERE
Venue: Marie Curie building. Facultad de Farmacia. Campus de San Juan, Universidad Miguel Hernández, Ctra. Valencia, s/n. KM 8.7, 03550, Sant Joan d'Alacant, Alicante, Spain
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INFORMATION AND DATA AVAILABLE FOR DOWNLOAD
COURSE LECTURES (pdf files)
Monday 9Tuesday 10Wednesday 11Thursday 12
9.00
10.00
Post-Genomic MicrobiologyHuman microbiome(Not available)Soil Metagenomics(Not available)
10.00
11.00
Overview on Meta-OmicsHuman microbiome. Oral microbiology(Not available)Sediment Metagenomics
11.30
12.30
New Sequencing TechnologiesSingle Cell GenomicsAquatic MetagenomicsMetaviriomes
12.30
13.30
Procaryotic Genome Assembly and annotationMetadata, microscopy and imagingEnrichments culture metagenomicsCRISPR system
PRACTICAL LECTURES (pdf files)
Monday 9Tuesday 10Wednesday 11Thursday 12
16.00
18.00
Introduction to Linux
Exercises I
Genome assembly and annotationMetagenomics


Assembling Metagenomes
Assembly and Annotation Guide

     
ADDITIONAL MATERIAL
FLX system workflowIon Torrent ChemistrySMRT Sequencing
Illumina sequencingNanopore Technologies
Useful Software
ACT Artemis(java)Artemis(java)Bioedit(x86)
Geneious v7(x86)Mauve v2.3(x86)PSPAD v4(x86)
SSH v3.2(x86)
     
 
SAMPLING INFORMATION
Sampling Meeting sites
   

Project Groups


ORGANIZERS:

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